com.affymetrix.genoviz.demo.adapter

Class SequenceAnnotAdapter

java.lang.Object

com.affymetrix.genoviz.demo.adapter.SequenceAnnotAdapter

All Implemented Interfaces:

com.affymetrix.genoviz.bioviews.NeoDataAdapterI

public class SequenceAnnotAdapter
extends Object
implements com.affymetrix.genoviz.bioviews.NeoDataAdapterI

Field Summary

Fields

Modifier and Type	Field and Description
protected com.affymetrix.genoviz.bioviews.MapGlyphFactory	factory
protected com.affymetrix.genoviz.bioviews.Scene	scene

Constructor Summary

Constructors

Constructor and Description
SequenceAnnotAdapter()

Method Summary

Modifier and Type	Method and Description
boolean	accepts(Object obj)
void	configure(Hashtable options)
void	configure(String options)
com.affymetrix.genoviz.bioviews.GlyphI	createGlyph(Object obj)
void	setScene(com.affymetrix.genoviz.bioviews.Scene scene)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

factory

protected com.affymetrix.genoviz.bioviews.MapGlyphFactory factory

scene

protected com.affymetrix.genoviz.bioviews.Scene scene

Constructor Detail

SequenceAnnotAdapter

public SequenceAnnotAdapter()

Method Detail

setScene

public void setScene(com.affymetrix.genoviz.bioviews.Scene scene)

Specified by:

setScene in interface com.affymetrix.genoviz.bioviews.NeoDataAdapterI

configure

public void configure(String options)

Specified by:

configure in interface com.affymetrix.genoviz.bioviews.NeoDataAdapterI

configure

public void configure(Hashtable options)

Specified by:

configure in interface com.affymetrix.genoviz.bioviews.NeoDataAdapterI

accepts

public boolean accepts(Object obj)

Specified by:

accepts in interface com.affymetrix.genoviz.bioviews.NeoDataAdapterI

createGlyph

public com.affymetrix.genoviz.bioviews.GlyphI createGlyph(Object obj)

Specified by:

createGlyph in interface com.affymetrix.genoviz.bioviews.NeoDataAdapterI