com.affymetrix.genoviz.demo

Class NeoTracerDemo

java.lang.Object

java.awt.Component

java.awt.Container

java.awt.Panel

java.applet.Applet

com.affymetrix.genoviz.demo.NeoTracerDemo

All Implemented Interfaces:

com.affymetrix.genoviz.event.NeoRangeListener, ActionListener, ComponentListener, ImageObserver, MenuContainer, Serializable, EventListener, Accessible

public class NeoTracerDemo
extends Applet
implements ActionListener, com.affymetrix.genoviz.event.NeoRangeListener, ComponentListener

Version:

$Id: NeoTracerDemo.java 6332 2010-07-02 15:55:49Z vbishnoi $

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class java.applet.Applet

Applet.AccessibleApplet

Nested classes/interfaces inherited from class java.awt.Panel

Panel.AccessibleAWTPanel

Nested classes/interfaces inherited from class java.awt.Container

Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy

Field Summary

Fields

Modifier and Type	Field and Description
com.affymetrix.genoviz.widget.NeoTracer	widget

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

Constructors

Constructor and Description
NeoTracerDemo()

Method Summary

Modifier and Type	Method and Description
void	actionPerformed(ActionEvent evt)
void	centerAtBase(int baseNum)
void	clipTrace(int theFirstBase, int theLastBase)
void	cloneWidget()
void	componentHidden(ComponentEvent e)
void	componentMoved(ComponentEvent e)
void	componentResized(ComponentEvent e)
void	componentShown(ComponentEvent e)
AppletContext	getAppletContext()
String	getAppletInfo()
URL	getCodeBase()
URL	getDocumentBase()
String	getParameter(String name)
void	init()
static void	main(String[] args)
void	rangeChanged(com.affymetrix.genoviz.event.NeoRangeEvent evt)
void	setBasesBackground(Color col)
void	setTrace(com.affymetrix.genoviz.datamodel.TraceI trace)
void	setTraceColors(Color[] colors)
void	setTraceLabel(String label)
void	setTracesBackground(Color col)
void	showProperties()
void	showStatus(String msg)
void	start()
void	stop()
void	zoomFrameSetup() Testing external zoom controls

Methods inherited from class java.applet.Applet

destroy, getAccessibleContext, getAudioClip, getAudioClip, getImage, getImage, getLocale, getParameterInfo, isActive, isValidateRoot, newAudioClip, play, play, resize, resize, setStub

Methods inherited from class java.awt.Panel

addNotify

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getInsets, getLayout, getListeners, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paint, paintComponents, paramString, preferredSize, print, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, removeNotify, setComponentZOrder, setFocusCycleRoot, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, setLayout, transferFocusDownCycle, update, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphics, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getToolkit, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isOpaque, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, reshape, revalidate, setBackground, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setLocation, setLocation, setMaximumSize, setMinimumSize, setName, setPreferredSize, setSize, setSize, setVisible, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

widget

public com.affymetrix.genoviz.widget.NeoTracer widget

Constructor Detail

NeoTracerDemo

public NeoTracerDemo()

Method Detail

getAppletInfo

public String getAppletInfo()

Overrides:

getAppletInfo in class Applet

init

public void init()

Overrides:

init in class Applet

setTrace

public void setTrace(com.affymetrix.genoviz.datamodel.TraceI trace)

setTraceLabel

public void setTraceLabel(String label)

start

public void start()

Overrides:

start in class Applet

stop

public void stop()

Overrides:

stop in class Applet

showProperties

public void showProperties()

centerAtBase

public void centerAtBase(int baseNum)

actionPerformed

public void actionPerformed(ActionEvent evt)

Specified by:

actionPerformed in interface ActionListener

cloneWidget

public void cloneWidget()

zoomFrameSetup

public void zoomFrameSetup()

Testing external zoom controls

setTraceColors

public void setTraceColors(Color[] colors)

setBasesBackground

public void setBasesBackground(Color col)

setTracesBackground

public void setTracesBackground(Color col)

clipTrace

public void clipTrace(int theFirstBase,
                      int theLastBase)

rangeChanged

public void rangeChanged(com.affymetrix.genoviz.event.NeoRangeEvent evt)

Specified by:

rangeChanged in interface com.affymetrix.genoviz.event.NeoRangeListener

getCodeBase

public URL getCodeBase()

Overrides:

getCodeBase in class Applet

getAppletContext

public AppletContext getAppletContext()

Overrides:

getAppletContext in class Applet

showStatus

public void showStatus(String msg)

Overrides:

showStatus in class Applet

getDocumentBase

public URL getDocumentBase()

Overrides:

getDocumentBase in class Applet

getParameter

public String getParameter(String name)

Overrides:

getParameter in class Applet

componentHidden

public void componentHidden(ComponentEvent e)

Specified by:

componentHidden in interface ComponentListener

componentMoved

public void componentMoved(ComponentEvent e)

Specified by:

componentMoved in interface ComponentListener

componentResized

public void componentResized(ComponentEvent e)

Specified by:

componentResized in interface ComponentListener

componentShown

public void componentShown(ComponentEvent e)

Specified by:

componentShown in interface ComponentListener

main

public static void main(String[] args)